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Rating Stats for

Maarten-vd-Sande

Rating
1488.21 (4,441,337th)

Reputation
156 (541,668th)

Page: 1 2 3

Title	Δ
How are cores on SLURM allocated in relation to memory and thread a...	0.00
MissingOutputException with Snakemake	0.00
Snakemake - How to set conda environment path	-1.12
Retrying a rule X times	0.00
How to install snakemake 4.3.X?	-1.69
Is it possible to add a conditional statement in snakemake's ru...	0.00
Snakemake 200000 job submission	0.00
Cannot enforce memory limits in SLURM	-1.72
Difference between using os.system and snakemake.shell	0.00
Command lines in snakemake	0.00
Example of writing shadow rules using Snakemake	0.00
NameError when ues awk in snakemake	0.00
Snakemake: Tranverse DAG depth-first?	0.00
How to choose the second wildcard for a rule depending on the first?	-1.81
snakemake: How to log python scripts executed by script directive?	0.00
How to trace-back exact software version(s) used to generate result...	+0.53
How to define key=var arguments in a snakemake profile yaml file	+0.01
Snakemake gives InputFunctionException when using --profile slurm	-0.49
Run Snakemake rule one sample at a time	+0.51
Using "snakemake --config" to pass a list of strings	0.00
Slurm - How to use all available CPUs for independent tasks?	-3.98
Snakemake: how to create rule without explicit output file, and onl...	+0.21
slurm, job allocating more CPUs than requested	0.00
Problems with the VEP snakemake wrapper	+0.03
Snakemake, RNA-seq : How can I execute one subpart of a pipeline or...	0.00
Using checkpoints with snakemake gives each instance of a rule all...	0.00
Snakemake - Rule that downloads data using sftp	0.00
Snakemake: How to handle dynamically created files with dynamically...	0.00
Force snakemake to run python2 in a rule without --use-conda	0.00
snakemake list rules to execute in cluster and local	0.00
Moving metadata storage for cluster jobs with snakemake	0.00
Snakemake slurm ouput file redirect to new directory	0.00
Extract details for past jobs in SLURM	0.00
Use special symbols in Snakemake parameter section	-3.73
submitting a snakemake job to the cluster from within a ('corre...	0.00
Snakemake - Missing MissingInputException in line 20: Missing input...	0.00
snakemake - replacing wildcards in input directive by anonymous fun...	+4.33
Use local directory for wrapper in Snakemake rule	0.00
snakemake batch creation of output	0.00
Snakemake: how to realize a mechanism to copy input/output files to...	0.00
"Only input files can be specified as functions" in snake...	0.00
downloading fastq from snakemake	+4.08
Snakemake : SFTP on local machine	-3.97
Format Snakemake Input Files in the Shell	0.00
How to access wildcards within a run directive	+4.08
How to set binding memory limits in snakemake	+4.41
snakemake : rule's input with different pattern	0.00
Is there a way to update conda and bioconductor packages in a yaml...	0.00
How to supply snakemake options within the Snakefile itself?	0.00
Snakemake use wildcards in path of python function	0.00